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Stephane Meystre

TitleEndowed Chair, SmartState Chair of the Translational Biomedical Informatics Center for Economic Exce
InstitutionMedical University of South Carolina
DepartmentPsychiatry and Behavioral Sciences
AddressP.O. Box MSC 200
405H
Cannon Place - 135 Cannon St.
Phone843-792-0015
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    Dr. Meystre is a SmartState Endowed Chair and Founding Director of the Translational Biomedical Informatics Center at MUSC. Dr. Meystre has a medical training and background, with graduate education and experience in biomedical informatics and Natural Language Processing (NLP). He has developed and evaluated NLP systems for clinical practice and for research, and led several projects applying NLP to clinical text for automatic text de-identification, or clinical information extraction. He is the Founder and CEO of Clinacuity, Inc.


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    Collapse selected publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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    1. Garvin JH, Kim Y, Gobbel GT, Matheny ME, Redd A, Bray BE, Heidenreich P, Bolton D, Heavirland J, Kelly N, Reeves R, Kalsy M, Goldstein MK, Meystre SM. Automating Quality Measures for Heart Failure Using Natural Language Processing: A Descriptive Study in the Department of Veterans Affairs. JMIR Med Inform. 2018 Jan 15; 6(1):e5. PMID: 29335238.
      View in: PubMed
    2. Meystre S, Gouripeddi R, Tieder J, Simmons J, Srivastava R, Shah S. Enhancing Comparative Effectiveness Research With Automated Pediatric Pneumonia Detection in a Multi-Institutional Clinical Repository: A PHIS+ Pilot Study. J Med Internet Res. 2017 May 15; 19(5):e162. PMID: 28506958.
      View in: PubMed
    3. Meystre SM, Kim Y, Gobbel GT, Matheny ME, Redd A, Bray BE, Garvin JH. Congestive heart failure information extraction framework for automated treatment performance measures assessment. J Am Med Inform Assoc. 2017 Apr 01; 24(e1):e40-e46. PMID: 27413122.
      View in: PubMed
    4. Khalifa A, Meystre S. Adapting existing natural language processing resources for cardiovascular risk factors identification in clinical notes. J Biomed Inform. 2015 Dec; 58 Suppl:S128-32. PMID: 26318122; PMCID: PMC4983192.
    5. Doing-Harris K, Livnat Y, Meystre S. Automated concept and relationship extraction for the semi-automated ontology management (SEAM) system. J Biomed Semantics. 2015; 6:15. PMID: 25874077; PMCID: PMC4396714.
    6. Meystre SM, Kim Y, Heavirland J, Williams J, Bray BE, Garvin J. Heart Failure Medications Detection and Prescription Status Classification in Clinical Narrative Documents. Stud Health Technol Inform. 2015; 216:609-13. PMID: 26262123; PMCID: PMC5009609.
    7. Kim Y, Garvin J, Goldstein MK, Meystre SM. Classification of Contextual Use of Left Ventricular Ejection Fraction Assessments. Stud Health Technol Inform. 2015; 216:599-603. PMID: 26262121.
      View in: PubMed
    8. Redd A, Pickard S, Meystre S, Scehnet J, Bolton D, Heavirland J, Weaver AL, Hope C, Garvin JH. Evaluation of PHI Hunter in Natural Language Processing Research. Perspect Health Inf Manag. 2015; 12:1f. PMID: 26807078; PMCID: PMC4700871.
    9. South BR, Mowery D, Suo Y, Leng J, Ferrández Ó, Meystre SM, Chapman WW. Evaluating the effects of machine pre-annotation and an interactive annotation interface on manual de-identification of clinical text. J Biomed Inform. 2014 Aug; 50:162-72. PMID: 24859155.
      View in: PubMed
    10. Meystre SM, Ferrández Ó, Friedlin FJ, South BR, Shen S, Samore MH. Text de-identification for privacy protection: a study of its impact on clinical text information content. J Biomed Inform. 2014 Aug; 50:142-50. PMID: 24502938.
      View in: PubMed
    11. Meystre S, Shen S, Hofmann D, Gundlapalli A. Can physicians recognize their own patients in de-identified notes? Stud Health Technol Inform. 2014; 205:778-82. PMID: 25160293.
      View in: PubMed
    12. Meystre SM, Ferrández O, South BR, Shen S, Samore MH. How much does automatic text de-identification impact clinical problems, tests, and treatments? AMIA Jt Summits Transl Sci Proc. 2013; 2013:177. PMID: 24303260.
      View in: PubMed
    13. Kim Y, Garvin J, Heavirland J, Meystre SM. Improving heart failure information extraction by domain adaptation. Stud Health Technol Inform. 2013; 192:185-9. PMID: 23920541.
      View in: PubMed
    14. Doing-Harris K, Meystre SM, Samore M, Ceusters W. Applying ontological realism to medically unexplained syndromes. Stud Health Technol Inform. 2013; 192:97-101. PMID: 23920523.
      View in: PubMed
    15. Ferrández Ó, South BR, Shen S, Friedlin FJ, Samore MH, Meystre SM. Generalizability and comparison of automatic clinical text de-identification methods and resources. AMIA Annu Symp Proc. 2012; 2012:199-208. PMID: 23304289; PMCID: PMC3540471.
    16. Ferrández O, South BR, Shen S, Friedlin FJ, Samore MH, Meystre SM. BoB, a best-of-breed automated text de-identification system for VHA clinical documents. J Am Med Inform Assoc. 2013 Jan 01; 20(1):77-83. PMID: 22947391; PMCID: PMC3555325.
    17. Ferrández O, South BR, Shen S, Friedlin FJ, Samore MH, Meystre SM. Evaluating current automatic de-identification methods with Veteran's health administration clinical documents. BMC Med Res Methodol. 2012 Jul 27; 12:109. PMID: 22839356; PMCID: PMC3445850.
    18. Meystre SM, Lee S, Jung CY, Chevrier RD. Common data model for natural language processing based on two existing standard information models: CDA+GrAF. J Biomed Inform. 2012 Aug; 45(4):703-10. PMID: 22197801.
      View in: PubMed
    19. Kim Y, Hurdle J, Meystre SM. Using UMLS lexical resources to disambiguate abbreviations in clinical text. AMIA Annu Symp Proc. 2011; 2011:715-22. PMID: 22195128; PMCID: PMC3243121.
    20. Meystre SM, Thibault J, Shen S, Hurdle JF, South BR. Textractor: a hybrid system for medications and reason for their prescription extraction from clinical text documents. J Am Med Inform Assoc. 2010 Sep-Oct; 17(5):559-62. PMID: 20819864; PMCID: PMC2995680.
    21. Meystre SM, Friedlin FJ, South BR, Shen S, Samore MH. Automatic de-identification of textual documents in the electronic health record: a review of recent research. BMC Med Res Methodol. 2010 Aug 02; 10:70. PMID: 20678228; PMCID: PMC2923159.
    22. Meystre SM, Thibault J, Shen S, Hurdle JF, South BR. Automatically detecting medications and the reason for their prescription in clinical narrative text documents. Stud Health Technol Inform. 2010; 160(Pt 2):944-8. PMID: 20841823; PMCID: PMC3238676.
    23. Meystre SM, Deshmukh VG, Mitchell J. A clinical use case to evaluate the i2b2 Hive: predicting asthma exacerbations. AMIA Annu Symp Proc. 2009 Nov 14; 2009:442-6. PMID: 20351896; PMCID: PMC2815458.
    24. Mayer J, Shen S, South BR, Meystre S, Friedlin FJ, Ray WR, Samore M. Inductive creation of an annotation schema and a reference standard for de-identification of VA electronic clinical notes. AMIA Annu Symp Proc. 2009 Nov 14; 2009:416-20. PMID: 20351891; PMCID: PMC2815367.
    25. Deshmukh VG, Meystre SM, Mitchell JA. Evaluating the informatics for integrating biology and the bedside system for clinical research. BMC Med Res Methodol. 2009 Oct 28; 9:70. PMID: 19863809; PMCID: PMC2779809.
    26. Rocha RA, Hurdle JF, Matney S, Matney SA, Narus SP, Meystre S, LaSalle B, Lasalle B, Deshmukh V, Hunter C, Mineau GP, Facelli JC, Mitchell JA, Joyce M. Utah's statewide informatics platform for translational and clinical science. AMIA Annu Symp Proc. 2008 Nov 06; 1114. PMID: 18999122.
      View in: PubMed
    27. Meystre SM, Haug PJ. Randomized controlled trial of an automated problem list with improved sensitivity. Int J Med Inform. 2008 Sep; 77(9):602-12. PMID: 18280787.
      View in: PubMed
    28. Meystre SM, Savova GK, Kipper-Schuler KC, Hurdle JF. Extracting information from textual documents in the electronic health record: a review of recent research. Yearb Med Inform. 2008; 128-44. PMID: 18660887.
      View in: PubMed
    29. Meystre S. Electronic patient records: some answers to the data representation and reuse challenges. Findings from the section on Patient Records. Yearb Med Inform. 2007; 47-9. PMID: 17700903.
      View in: PubMed
    30. Meystre S, Haug P. Improving the sensitivity of the problem list in an intensive care unit by using natural language processing. AMIA Annu Symp Proc. 2006; 554-8. PMID: 17238402; PMCID: PMC1839473.
    31. Meystre S, Haug PJ. Natural language processing to extract medical problems from electronic clinical documents: performance evaluation. J Biomed Inform. 2006 Dec; 39(6):589-99. PMID: 16359928.
      View in: PubMed
    32. Meystre S, Haug PJ. Automation of a problem list using natural language processing. BMC Med Inform Decis Mak. 2005 Aug 31; 5:30. PMID: 16135244; PMCID: PMC1208893.
    33. Meystre S. The current state of telemonitoring: a comment on the literature. Telemed J E Health. 2005 Feb; 11(1):63-9. PMID: 15785222.
      View in: PubMed
    34. Meystre S, Haug PJ. Evaluation of Medical Problem Extraction from Electronic Clinical Documents Using MetaMap Transfer (MMTx). Stud Health Technol Inform. 2005; 116:823-8. PMID: 16160360.
      View in: PubMed
    35. Meystre SM, Haug PJ. Comparing natural language processing tools to extract medical problems from narrative text. AMIA Annu Symp Proc. 2005; 525-9. PMID: 16779095; PMCID: PMC1560561.
    36. Meystre S, Haug PJ. Medical problem and document model for natural language understanding. AMIA Annu Symp Proc. 2003; 455-9. PMID: 14728214; PMCID: PMC1479970.
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